Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 LTB4R2-202ENST00000528054 3092 ntBASIC18.79■□□□□ 0.6
TRIM11Q96F44 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 AC063952.2-201ENST00000498792 1227 ntBASIC18.79■□□□□ 0.6
TRIM11Q96F44 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 VENTXP5-201ENST00000523979 775 ntBASIC18.79■□□□□ 0.6
TRIM11Q96F44 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 PP12613-201ENST00000424958 2230 ntBASIC18.78■□□□□ 0.6
TRIM11Q96F44 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 AC005104.2-201ENST00000427818 678 ntBASIC18.78■□□□□ 0.6
TRIM11Q96F44 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 AC068472.1-201ENST00000474589 881 ntBASIC18.78■□□□□ 0.6
TRIM11Q96F44 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM11Q96F44 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM11Q96F44 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRIM11Q96F44 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM11Q96F44 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
TRIM11Q96F44 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TRIM11Q96F44 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM11Q96F44 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM11Q96F44 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM11Q96F44 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms