Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.92■□□□□ 0.62
SHC3Q92529 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.92■□□□□ 0.62
SHC3Q92529 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.92■□□□□ 0.62
SHC3Q92529 AC091607.1-201ENST00000490318 1060 ntBASIC18.92■□□□□ 0.62
SHC3Q92529 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.92■□□□□ 0.62
SHC3Q92529 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.92■□□□□ 0.62
SHC3Q92529 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.92■□□□□ 0.62
SHC3Q92529 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.92■□□□□ 0.62
SHC3Q92529 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.92■□□□□ 0.62
SHC3Q92529 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.92■□□□□ 0.62
SHC3Q92529 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SHC3Q92529 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SHC3Q92529 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.92■□□□□ 0.62
SHC3Q92529 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.92■□□□□ 0.62
SHC3Q92529 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHC3Q92529 IER3-202ENST00000376377 1350 ntBASIC18.92■□□□□ 0.62
SHC3Q92529 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.91■□□□□ 0.62
SHC3Q92529 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SHC3Q92529 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.91■□□□□ 0.62
SHC3Q92529 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SHC3Q92529 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.91■□□□□ 0.62
SHC3Q92529 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.91■□□□□ 0.62
SHC3Q92529 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.91■□□□□ 0.62
SHC3Q92529 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
SHC3Q92529 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.91■□□□□ 0.62
SHC3Q92529 AC002558.1-201ENST00000488906 803 ntBASIC18.91■□□□□ 0.62
SHC3Q92529 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.91■□□□□ 0.62
SHC3Q92529 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.91■□□□□ 0.62
SHC3Q92529 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.91■□□□□ 0.62
SHC3Q92529 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 AP005901.3-202ENST00000581653 237 ntBASIC18.91■□□□□ 0.62
SHC3Q92529 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SHC3Q92529 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SHC3Q92529 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
SHC3Q92529 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.91■□□□□ 0.62
SHC3Q92529 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SHC3Q92529 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SHC3Q92529 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHC3Q92529 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SHC3Q92529 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHC3Q92529 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SHC3Q92529 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.9■□□□□ 0.62
SHC3Q92529 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 AL023806.1-201ENST00000603994 1649 ntBASIC18.9■□□□□ 0.62
SHC3Q92529 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SHC3Q92529 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SHC3Q92529 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SHC3Q92529 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 LYSMD4-203ENST00000378904 2122 ntBASIC18.9■□□□□ 0.62
SHC3Q92529 AP002383.4-201ENST00000442518 975 ntBASIC18.9■□□□□ 0.62
SHC3Q92529 TSSC2-201ENST00000450217 709 ntBASIC18.9■□□□□ 0.62
SHC3Q92529 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.9■□□□□ 0.62
SHC3Q92529 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.9■□□□□ 0.62
SHC3Q92529 KRT18P35-201ENST00000510488 1269 ntBASIC18.9■□□□□ 0.62
SHC3Q92529 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.9■□□□□ 0.62
SHC3Q92529 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.9■□□□□ 0.62
SHC3Q92529 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SHC3Q92529 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.9■□□□□ 0.62
SHC3Q92529 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.9■□□□□ 0.62
SHC3Q92529 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SHC3Q92529 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SHC3Q92529 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC3Q92529 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.9■□□□□ 0.62
SHC3Q92529 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHC3Q92529 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.9■□□□□ 0.62
SHC3Q92529 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms