Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 PCDHB17P-201ENST00000539533 2393 ntBASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CKAP2Q8WWK9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CKAP2Q8WWK9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CKAP2Q8WWK9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CKAP2Q8WWK9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CKAP2Q8WWK9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.64■□□□□ 0.42
CKAP2Q8WWK9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CKAP2Q8WWK9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CKAP2Q8WWK9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 AL353807.1-201ENST00000427475 662 ntBASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 DDX43P3-201ENST00000441064 443 ntBASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 CA15P1-201ENST00000481698 905 ntBASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 LINC00167-201ENST00000530583 1419 ntBASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.64■□□□□ 0.41
CKAP2Q8WWK9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 AC026366.1-201ENST00000488803 879 ntBASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 AC104390.1-201ENST00000555663 520 ntBASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CKAP2Q8WWK9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms