Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 AC106730.1-201ENST00000566722 1090 ntBASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SH3RF2Q8TEC5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SH3RF2Q8TEC5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SH3RF2Q8TEC5 AC093677.2-201ENST00000600169 1863 ntBASIC18.39■□□□□ 0.54
SH3RF2Q8TEC5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.39■□□□□ 0.54
SH3RF2Q8TEC5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 MTDHP4-201ENST00000600287 670 ntBASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.39■□□□□ 0.53
SH3RF2Q8TEC5 HLA-J-201ENST00000462773 1622 ntBASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 BX005266.1-201ENST00000473402 457 ntBASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 KRT18P58-201ENST00000527480 1120 ntBASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 AC012640.2-201ENST00000561606 901 ntBASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 PMPCAP1-201ENST00000508114 1576 ntBASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 AC135776.1-201ENST00000319817 2481 ntBASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH3RF2Q8TEC5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms