Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 LINC00265-3P-201ENST00000447588 903 ntBASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 AC112698.1-201ENST00000510299 916 ntBASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 TPSP2-201ENST00000561760 610 ntBASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 AL592071.1-201ENST00000611956 408 ntBASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 AL138688.1-201ENST00000624851 1594 ntBASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 TSPY12P-201ENST00000421279 868 ntBASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 DRAXINP1-201ENST00000437611 948 ntBASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 AC116407.2-201ENST00000613639 860 ntBASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 HLA-J-201ENST00000462773 1622 ntBASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCC2Q8TAQ2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 LTB4R2-202ENST00000528054 3092 ntBASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 MIR3652-201ENST00000579335 131 ntBASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 CLEC4GP1-201ENST00000596555 870 ntBASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SMARCC2Q8TAQ2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMARCC2Q8TAQ2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMARCC2Q8TAQ2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.77■□□□□ 0.91
SMARCC2Q8TAQ2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 TOB2P1-201ENST00000469761 992 ntBASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 AC068472.1-201ENST00000474589 881 ntBASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 LINC01451-201ENST00000623792 534 ntBASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCC2Q8TAQ2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms