Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SPTSSBQ8NFR3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 AC012313.8-201ENST00000595059 5402 ntBASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 RARRES2P2-201ENST00000394842 485 ntBASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 SMUG1P1-201ENST00000590640 811 ntBASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 AL031848.2-201ENST00000607670 837 ntBASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SPTSSBQ8NFR3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 PVT1_1.1-201ENST00000615125 194 ntBASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC9.74□□□□□ -0.85
SPTSSBQ8NFR3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms