Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC197Q8NCU1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC197Q8NCU1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC197Q8NCU1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.64■□□□□ 0.42
CCDC197Q8NCU1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 AL513523.2-202ENST00000427283 2040 ntBASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 AC004264.1-201ENST00000608354 794 ntBASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 AC092118.2-201ENST00000613495 667 ntBASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 AC092068.3-201ENST00000587894 2016 ntBASIC17.64■□□□□ 0.41
CCDC197Q8NCU1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 NBPF21P-201ENST00000425093 1451 ntBASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 HLA-B-256ENST00000639848 1089 ntBASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 AC116353.5-201ENST00000638148 1699 ntBASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 AC079328.2-201ENST00000561241 3354 ntBASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 AC016396.2-201ENST00000562575 1417 ntBASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC197Q8NCU1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC197Q8NCU1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms