Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 NOC2LP2-201ENST00000407594 1944 ntBASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRAM1L1Q8N609 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 AC005104.2-201ENST00000427818 678 ntBASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 AC132008.2-207ENST00000454517 770 ntBASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 UNC93B7-201ENST00000509439 705 ntBASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRAM1L1Q8N609 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 AC002558.1-201ENST00000488906 803 ntBASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 AC019129.2-201ENST00000609837 1235 ntBASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 AD001527.2-201ENST00000622994 785 ntBASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 LINC01451-201ENST00000623792 534 ntBASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 SIRPAP1-201ENST00000448467 1770 ntBASIC17.52■□□□□ 0.4
TRAM1L1Q8N609 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAM1L1Q8N609 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAM1L1Q8N609 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRAM1L1Q8N609 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TRAM1L1Q8N609 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAM1L1Q8N609 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms