Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC24.4■■□□□ 1.5
ARHGEF28Q8N1W1 CD63-210ENST00000550776 870 ntTSL 5 BASIC24.4■■□□□ 1.5
ARHGEF28Q8N1W1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC24.4■■□□□ 1.5
ARHGEF28Q8N1W1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ARHGEF28Q8N1W1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ARHGEF28Q8N1W1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC24.39■■□□□ 1.5
ARHGEF28Q8N1W1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC24.39■■□□□ 1.49
ARHGEF28Q8N1W1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
ARHGEF28Q8N1W1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
ARHGEF28Q8N1W1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ARHGEF28Q8N1W1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
ARHGEF28Q8N1W1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 RPS8P6-201ENST00000426177 609 ntBASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 AC211486.1-202ENST00000416371 468 ntBASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 RHOQP3-201ENST00000437982 621 ntBASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 AC211476.1-201ENST00000503899 468 ntBASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 KRT19P2-202ENST00000557173 1012 ntBASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
ARHGEF28Q8N1W1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 HTR5BP-201ENST00000430851 1154 ntBASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 PRSS29P-201ENST00000440800 595 ntBASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARHGEF28Q8N1W1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 METTL21AP1-201ENST00000438852 635 ntBASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 TK1-204ENST00000590430 683 ntTSL 3 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ARHGEF28Q8N1W1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 PTCHD3P3-201ENST00000403073 906 ntBASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 MKNK2P1-201ENST00000437526 628 ntBASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 MIR3687-2-201ENST00000577708 61 ntBASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 MIR3687-1-201ENST00000614492 61 ntBASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 VN2R19P-201ENST00000442399 1052 ntBASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
ARHGEF28Q8N1W1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms