Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 AC011467.2-201ENST00000598425 242 ntBASIC19.26■□□□□ 0.67
VPS52Q8N1B4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 FZD10-202ENST00000539839 3282 ntBASIC19.26■□□□□ 0.67
VPS52Q8N1B4 AC125634.1-201ENST00000438758 1403 ntBASIC19.25■□□□□ 0.67
VPS52Q8N1B4 LINC01126-201ENST00000623515 1646 ntBASIC19.25■□□□□ 0.67
VPS52Q8N1B4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 POLD2P1-201ENST00000511220 997 ntBASIC19.25■□□□□ 0.67
VPS52Q8N1B4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
VPS52Q8N1B4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 RPS2P28-201ENST00000314255 741 ntBASIC19.24■□□□□ 0.67
VPS52Q8N1B4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 AC116407.3-201ENST00000623905 1129 ntBASIC19.24■□□□□ 0.67
VPS52Q8N1B4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS52Q8N1B4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms