Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 AL096828.2-201ENST00000567259 1965 ntBASIC24.4■■□□□ 1.5
XRN1Q8IZH2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
XRN1Q8IZH2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 AP001059.3-201ENST00000619053 235 ntBASIC24.39■■□□□ 1.5
XRN1Q8IZH2 AF228730.6-201ENST00000641497 218 ntBASIC24.39■■□□□ 1.5
XRN1Q8IZH2 AC084121.3-201ENST00000641716 218 ntBASIC24.39■■□□□ 1.5
XRN1Q8IZH2 AC105233.6-201ENST00000642093 218 ntBASIC24.39■■□□□ 1.5
XRN1Q8IZH2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
XRN1Q8IZH2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
XRN1Q8IZH2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.49
XRN1Q8IZH2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
XRN1Q8IZH2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
XRN1Q8IZH2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
XRN1Q8IZH2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
XRN1Q8IZH2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 HLA-DRB6-201ENST00000411500 1235 ntBASIC24.38■■□□□ 1.49
XRN1Q8IZH2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 IGHV3-52-201ENST00000519770 353 ntBASIC24.38■■□□□ 1.49
XRN1Q8IZH2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 AC116562.4-201ENST00000641316 2276 ntBASIC24.38■■□□□ 1.49
XRN1Q8IZH2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 AC026120.1-201ENST00000611536 926 ntBASIC24.38■■□□□ 1.49
XRN1Q8IZH2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
XRN1Q8IZH2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 CNN2P2-201ENST00000443536 909 ntBASIC24.37■■□□□ 1.49
XRN1Q8IZH2 CNN2P3-201ENST00000450201 906 ntBASIC24.37■■□□□ 1.49
XRN1Q8IZH2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 DUX4L27-201ENST00000554796 1261 ntBASIC24.37■■□□□ 1.49
XRN1Q8IZH2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 AL136317.3-201ENST00000618497 906 ntBASIC24.37■■□□□ 1.49
XRN1Q8IZH2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC24.37■■□□□ 1.49
XRN1Q8IZH2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC24.36■■□□□ 1.49
XRN1Q8IZH2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
XRN1Q8IZH2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
XRN1Q8IZH2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
XRN1Q8IZH2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
XRN1Q8IZH2 AC236430.1-201ENST00000402231 743 ntBASIC24.36■■□□□ 1.49
XRN1Q8IZH2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC24.36■■□□□ 1.49
XRN1Q8IZH2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC24.36■■□□□ 1.49
XRN1Q8IZH2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms