Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC025062.2-201ENST00000605477 670 ntBASIC18.06■□□□□ 0.48
CHPFQ8IZ52 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 AP000867.4-201ENST00000641616 219 ntBASIC18.06■□□□□ 0.48
CHPFQ8IZ52 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHPFQ8IZ52 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AC073592.3-201ENST00000625118 1834 ntBASIC18.05■□□□□ 0.48
CHPFQ8IZ52 PMS2P7-201ENST00000506558 1336 ntBASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AC022898.2-201ENST00000616822 1312 ntBASIC18.05■□□□□ 0.48
CHPFQ8IZ52 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AC135050.7-201ENST00000624508 2218 ntBASIC18.05■□□□□ 0.48
CHPFQ8IZ52 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 MTDHP4-201ENST00000600287 670 ntBASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 AC093010.1-201ENST00000473625 1624 ntBASIC18.05■□□□□ 0.48
CHPFQ8IZ52 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHPFQ8IZ52 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 AC092865.5-201ENST00000545435 363 ntBASIC18.04■□□□□ 0.48
CHPFQ8IZ52 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 AC104109.2-201ENST00000602919 1418 ntBASIC18.04■□□□□ 0.48
CHPFQ8IZ52 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 AC010460.3-201ENST00000511359 1579 ntBASIC18.04■□□□□ 0.48
CHPFQ8IZ52 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHPFQ8IZ52 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHPFQ8IZ52 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms