Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 EMBP1-201ENST00000458200 901 ntBASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM48Q8IWZ4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 AC135776.1-201ENST00000319817 2481 ntBASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 AC026396.1-201ENST00000419388 421 ntBASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 MIR5100-201ENST00000579544 119 ntBASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.42■□□□□ 0.38
TRIM48Q8IWZ4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 AC093677.2-201ENST00000600169 1863 ntBASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 AC125634.1-201ENST00000438758 1403 ntBASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
TRIM48Q8IWZ4 AL138831.2-201ENST00000606564 490 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms