Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 KRT18P41-201ENST00000518924 1277 ntBASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 AC133552.2-202ENST00000575694 574 ntBASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 FAM45BP-202ENST00000592932 1624 ntBASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CROCCP3Q8IVE0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 AL121832.2-201ENST00000610979 668 ntBASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms