Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF135Q8IUD6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 AL031598.1-201ENST00000561511 1773 ntBASIC18.81■□□□□ 0.6
RNF135Q8IUD6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 AC009113.1-201ENST00000570267 2443 ntBASIC18.81■□□□□ 0.6
RNF135Q8IUD6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 AP002414.3-201ENST00000589352 1468 ntBASIC18.81■□□□□ 0.6
RNF135Q8IUD6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 KRT8P50-201ENST00000562022 1438 ntBASIC18.81■□□□□ 0.6
RNF135Q8IUD6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF135Q8IUD6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 AL645939.2-201ENST00000427340 991 ntBASIC18.8■□□□□ 0.6
RNF135Q8IUD6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 AC005829.1-201ENST00000570002 483 ntBASIC18.8■□□□□ 0.6
RNF135Q8IUD6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 AC126763.1-201ENST00000552015 2118 ntBASIC18.8■□□□□ 0.6
RNF135Q8IUD6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF135Q8IUD6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF135Q8IUD6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms