Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 AC098818.2-201ENST00000564925 2320 ntBASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 C20orf181-201ENST00000623918 480 ntBASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 AL805961.1-202ENST00000641562 540 ntBASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 AC120498.9-201ENST00000339021 3867 ntBASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4RL1Q86UN2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 GPR89P-201ENST00000407924 1495 ntBASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 LINC00982-205ENST00000420957 435 ntBASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 HTR5BP-201ENST00000430851 1154 ntBASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 KRT18P28-201ENST00000453838 1332 ntBASIC18.98■□□□□ 0.63
RTN4RL1Q86UN2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 IGHV3-52-201ENST00000519770 353 ntBASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4RL1Q86UN2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN4RL1Q86UN2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms