Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF546Q86UE3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 MIR663A-201ENST00000385250 93 ntBASIC14.79□□□□□ -0.04
ZNF546Q86UE3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 RCC2P3-201ENST00000418112 1537 ntBASIC14.79□□□□□ -0.04
ZNF546Q86UE3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 AC091874.3-201ENST00000512672 1195 ntBASIC14.79□□□□□ -0.04
ZNF546Q86UE3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 AL121832.2-201ENST00000610979 668 ntBASIC14.79□□□□□ -0.04
ZNF546Q86UE3 AL050303.2-201ENST00000619798 666 ntBASIC14.79□□□□□ -0.04
ZNF546Q86UE3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 AC079328.2-201ENST00000561241 3354 ntBASIC14.79□□□□□ -0.04
ZNF546Q86UE3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF546Q86UE3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 AC007950.2-201ENST00000615045 2347 ntBASIC14.78□□□□□ -0.04
ZNF546Q86UE3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 AC060834.1-201ENST00000443027 2032 ntBASIC14.78□□□□□ -0.04
ZNF546Q86UE3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 AC080038.1-201ENST00000611274 1154 ntBASIC14.78□□□□□ -0.04
ZNF546Q86UE3 AC073111.5-205ENST00000641717 521 ntBASIC14.78□□□□□ -0.04
ZNF546Q86UE3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 AC006449.5-201ENST00000610658 2098 ntBASIC14.78□□□□□ -0.04
ZNF546Q86UE3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF546Q86UE3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms