Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AL513210.1-201ENST00000629608 234 ntBASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 AC025580.3-201ENST00000617932 1424 ntBASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC141Q6ZP82 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC141Q6ZP82 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 RNF34-208ENST00000555076 593 ntTSL 3 BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 AC023141.13-201ENST00000604991 943 ntBASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC26.24■■□□□ 1.79
CCDC141Q6ZP82 ENSA-206ENST00000361631 725 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 CXCL1P1-201ENST00000502804 216 ntBASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 USP49-202ENST00000373010 2446 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 AL645939.2-201ENST00000427340 991 ntBASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 ACTL9-202ENST00000612068 1252 ntBASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 AC093028.1-201ENST00000622998 982 ntBASIC26.23■■□□□ 1.79
CCDC141Q6ZP82 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 AL139400.1-201ENST00000366220 510 ntBASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 AC074386.1-202ENST00000463561 864 ntBASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC141Q6ZP82 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 AL020996.1-203ENST00000536896 2307 ntBASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC141Q6ZP82 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms