Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 AC108860.2-201ENST00000562760 2183 ntBASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 AL645929.1-201ENST00000420084 975 ntBASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF549Q6P9A3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNF549Q6P9A3 HLA-J-201ENST00000462773 1622 ntBASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 AL031133.1-201ENST00000406807 723 ntBASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 LINC01238-205ENST00000567549 1107 ntBASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms