Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01559Q495D7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC01559Q495D7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
LINC01559Q495D7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01559Q495D7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.33□□□□□ -0.27
LINC01559Q495D7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01559Q495D7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
LINC01559Q495D7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
LINC01559Q495D7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 AL118508.1-201ENST00000613502 2345 ntBASIC13.33□□□□□ -0.28
LINC01559Q495D7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 NKILA-202ENST00000614771 2598 ntBASIC13.33□□□□□ -0.28
LINC01559Q495D7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
LINC01559Q495D7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01559Q495D7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 MIR3180-4-201ENST00000582223 153 ntBASIC13.32□□□□□ -0.28
LINC01559Q495D7 MIR4674-201ENST00000582457 87 ntBASIC13.32□□□□□ -0.28
LINC01559Q495D7 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 AC020658.4-201ENST00000613987 684 ntBASIC13.32□□□□□ -0.28
LINC01559Q495D7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 AC073648.6-201ENST00000641589 218 ntBASIC13.32□□□□□ -0.28
LINC01559Q495D7 CROCCP2-202ENST00000412962 2773 ntBASIC13.32□□□□□ -0.28
LINC01559Q495D7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01559Q495D7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
LINC01559Q495D7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
LINC01559Q495D7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01559Q495D7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01559Q495D7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01559Q495D7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01559Q495D7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01559Q495D7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms