Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 AL024508.2-201ENST00000607749 1894 ntBASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 KRT18P27-201ENST00000427733 1299 ntBASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 AC005829.1-201ENST00000570002 483 ntBASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 AC064836.3-201ENST00000607928 673 ntBASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTC1Q2NKJ3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 AC067852.2-201ENST00000590513 2313 ntBASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.95■□□□□ 0.62
CTC1Q2NKJ3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTC1Q2NKJ3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms