Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.8■□□□□ 0.6
DSC1Q08554 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.8■□□□□ 0.6
DSC1Q08554 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.8■□□□□ 0.6
DSC1Q08554 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.8■□□□□ 0.6
DSC1Q08554 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DSC1Q08554 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.79■□□□□ 0.6
DSC1Q08554 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.79■□□□□ 0.6
DSC1Q08554 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.79■□□□□ 0.6
DSC1Q08554 RPSAP43-201ENST00000402237 625 ntBASIC18.79■□□□□ 0.6
DSC1Q08554 IGHV3-65-201ENST00000523210 341 ntBASIC18.79■□□□□ 0.6
DSC1Q08554 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.79■□□□□ 0.6
DSC1Q08554 AC008667.4-201ENST00000607370 168 ntBASIC18.79■□□□□ 0.6
DSC1Q08554 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.79■□□□□ 0.6
DSC1Q08554 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.79■□□□□ 0.6
DSC1Q08554 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
DSC1Q08554 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.79■□□□□ 0.6
DSC1Q08554 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.79■□□□□ 0.6
DSC1Q08554 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 AC009113.1-201ENST00000570267 2443 ntBASIC18.79■□□□□ 0.6
DSC1Q08554 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DSC1Q08554 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
DSC1Q08554 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DSC1Q08554 GPX1P2-201ENST00000429271 606 ntBASIC18.78■□□□□ 0.6
DSC1Q08554 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 AC108073.2-201ENST00000464002 357 ntBASIC18.78■□□□□ 0.6
DSC1Q08554 RPS15P9-201ENST00000494093 319 ntBASIC18.78■□□□□ 0.6
DSC1Q08554 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.78■□□□□ 0.6
DSC1Q08554 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.78■□□□□ 0.6
DSC1Q08554 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.78■□□□□ 0.6
DSC1Q08554 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.78■□□□□ 0.6
DSC1Q08554 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.78■□□□□ 0.6
DSC1Q08554 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DSC1Q08554 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.78■□□□□ 0.6
DSC1Q08554 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DSC1Q08554 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DSC1Q08554 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DSC1Q08554 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.77■□□□□ 0.6
DSC1Q08554 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DSC1Q08554 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
DSC1Q08554 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.77■□□□□ 0.6
DSC1Q08554 MYCLP1-201ENST00000372451 1075 ntBASIC18.77■□□□□ 0.6
DSC1Q08554 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.77■□□□□ 0.6
DSC1Q08554 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DSC1Q08554 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.77■□□□□ 0.6
DSC1Q08554 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.77■□□□□ 0.6
DSC1Q08554 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.77■□□□□ 0.6
DSC1Q08554 KRT18P2-201ENST00000447938 1258 ntBASIC18.77■□□□□ 0.6
DSC1Q08554 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.77■□□□□ 0.6
DSC1Q08554 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.77■□□□□ 0.6
DSC1Q08554 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.77■□□□□ 0.6
DSC1Q08554 AC055717.3-201ENST00000622967 595 ntBASIC18.77■□□□□ 0.6
DSC1Q08554 AL805961.1-202ENST00000641562 540 ntBASIC18.77■□□□□ 0.6
DSC1Q08554 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.77■□□□□ 0.6
DSC1Q08554 AC087289.5-201ENST00000586076 3175 ntBASIC18.77■□□□□ 0.6
DSC1Q08554 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DSC1Q08554 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DSC1Q08554 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.77■□□□□ 0.6
DSC1Q08554 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DSC1Q08554 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.77■□□□□ 0.59
DSC1Q08554 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.77■□□□□ 0.59
DSC1Q08554 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.76■□□□□ 0.59
DSC1Q08554 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.76■□□□□ 0.59
DSC1Q08554 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.76■□□□□ 0.59
DSC1Q08554 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.76■□□□□ 0.59
DSC1Q08554 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.76■□□□□ 0.59
DSC1Q08554 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms