Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC087163.2-201ENST00000457299 853 ntBASIC23.7■■□□□ 1.39
COL16A1Q07092 SLC25A6P2-201ENST00000497974 877 ntBASIC23.7■■□□□ 1.39
COL16A1Q07092 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC23.7■■□□□ 1.39
COL16A1Q07092 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC23.7■■□□□ 1.39
COL16A1Q07092 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC23.7■■□□□ 1.39
COL16A1Q07092 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC23.7■■□□□ 1.39
COL16A1Q07092 SSH2-211ENST00000590153 570 ntTSL 4 BASIC23.7■■□□□ 1.39
COL16A1Q07092 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL16A1Q07092 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.7■■□□□ 1.38
COL16A1Q07092 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL16A1Q07092 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.7■■□□□ 1.38
COL16A1Q07092 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL16A1Q07092 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.7■■□□□ 1.38
COL16A1Q07092 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC23.7■■□□□ 1.38
COL16A1Q07092 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.7■■□□□ 1.38
COL16A1Q07092 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
COL16A1Q07092 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC23.7■■□□□ 1.38
COL16A1Q07092 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL16A1Q07092 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL16A1Q07092 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
COL16A1Q07092 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL16A1Q07092 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL16A1Q07092 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.69■■□□□ 1.38
COL16A1Q07092 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL16A1Q07092 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL16A1Q07092 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.69■■□□□ 1.38
COL16A1Q07092 AC005082.1-201ENST00000413042 2259 ntBASIC23.69■■□□□ 1.38
COL16A1Q07092 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC23.69■■□□□ 1.38
COL16A1Q07092 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL16A1Q07092 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL16A1Q07092 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL16A1Q07092 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.68■■□□□ 1.38
COL16A1Q07092 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL16A1Q07092 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL16A1Q07092 SLC25A6P5-201ENST00000435663 894 ntBASIC23.68■■□□□ 1.38
COL16A1Q07092 RPS2P32-201ENST00000439199 892 ntBASIC23.68■■□□□ 1.38
COL16A1Q07092 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC23.68■■□□□ 1.38
COL16A1Q07092 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL16A1Q07092 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC23.68■■□□□ 1.38
COL16A1Q07092 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC23.68■■□□□ 1.38
COL16A1Q07092 SNX12-206ENST00000622259 661 ntTSL 5 BASIC23.68■■□□□ 1.38
COL16A1Q07092 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL16A1Q07092 AC100757.3-201ENST00000622361 1406 ntBASIC23.68■■□□□ 1.38
COL16A1Q07092 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL16A1Q07092 AL032819.2-201ENST00000624543 2162 ntBASIC23.68■■□□□ 1.38
COL16A1Q07092 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL16A1Q07092 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.68■■□□□ 1.38
COL16A1Q07092 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC23.68■■□□□ 1.38
COL16A1Q07092 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL16A1Q07092 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL16A1Q07092 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL16A1Q07092 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL16A1Q07092 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC23.67■■□□□ 1.38
COL16A1Q07092 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL16A1Q07092 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
COL16A1Q07092 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC23.67■■□□□ 1.38
COL16A1Q07092 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC23.67■■□□□ 1.38
COL16A1Q07092 AL512638.1-201ENST00000457493 794 ntBASIC23.67■■□□□ 1.38
COL16A1Q07092 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
COL16A1Q07092 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC23.67■■□□□ 1.38
COL16A1Q07092 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL16A1Q07092 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
COL16A1Q07092 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC23.67■■□□□ 1.38
COL16A1Q07092 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL16A1Q07092 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
COL16A1Q07092 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
COL16A1Q07092 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL16A1Q07092 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL16A1Q07092 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.66■■□□□ 1.38
COL16A1Q07092 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC23.66■■□□□ 1.38
COL16A1Q07092 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC23.66■■□□□ 1.38
COL16A1Q07092 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
COL16A1Q07092 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.66■■□□□ 1.38
COL16A1Q07092 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.66■■□□□ 1.38
COL16A1Q07092 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.66■■□□□ 1.38
COL16A1Q07092 HARS-203ENST00000431330 1774 ntTSL 2 BASIC23.66■■□□□ 1.38
COL16A1Q07092 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
COL16A1Q07092 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 ACA64.2-201ENST00000459014 129 ntBASIC23.66■■□□□ 1.38
COL16A1Q07092 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL16A1Q07092 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.66■■□□□ 1.38
COL16A1Q07092 AC017083.2-201ENST00000608069 979 ntBASIC23.66■■□□□ 1.38
COL16A1Q07092 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL16A1Q07092 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.65■■□□□ 1.38
COL16A1Q07092 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL16A1Q07092 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
COL16A1Q07092 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC23.65■■□□□ 1.38
COL16A1Q07092 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC23.65■■□□□ 1.38
COL16A1Q07092 AC107918.2-201ENST00000530817 355 ntBASIC23.65■■□□□ 1.38
COL16A1Q07092 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC23.65■■□□□ 1.38
COL16A1Q07092 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
COL16A1Q07092 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC23.65■■□□□ 1.38
COL16A1Q07092 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms