Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP46P62068 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.66■□□□□ 0.58
USP46P62068 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
USP46P62068 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.66■□□□□ 0.58
USP46P62068 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP46P62068 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP46P62068 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 RBM17P3-201ENST00000417687 1192 ntBASIC18.65■□□□□ 0.58
USP46P62068 AP000347.1-202ENST00000435868 847 ntBASIC18.65■□□□□ 0.58
USP46P62068 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.65■□□□□ 0.58
USP46P62068 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.65■□□□□ 0.58
USP46P62068 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.65■□□□□ 0.58
USP46P62068 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
USP46P62068 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.65■□□□□ 0.58
USP46P62068 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP46P62068 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.65■□□□□ 0.58
USP46P62068 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP46P62068 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP46P62068 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP46P62068 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.64■□□□□ 0.58
USP46P62068 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
USP46P62068 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP46P62068 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP46P62068 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.64■□□□□ 0.58
USP46P62068 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP46P62068 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.64■□□□□ 0.58
USP46P62068 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.64■□□□□ 0.57
USP46P62068 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP46P62068 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.64■□□□□ 0.57
USP46P62068 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.64■□□□□ 0.57
USP46P62068 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.64■□□□□ 0.57
USP46P62068 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.64■□□□□ 0.57
USP46P62068 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.64■□□□□ 0.57
USP46P62068 AC079776.4-201ENST00000511039 504 ntBASIC18.64■□□□□ 0.57
USP46P62068 AL662844.1-201ENST00000546340 181 ntBASIC18.64■□□□□ 0.57
USP46P62068 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.64■□□□□ 0.57
USP46P62068 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.64■□□□□ 0.57
USP46P62068 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.64■□□□□ 0.57
USP46P62068 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.64■□□□□ 0.57
USP46P62068 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
USP46P62068 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.64■□□□□ 0.57
USP46P62068 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP46P62068 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP46P62068 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.64■□□□□ 0.57
USP46P62068 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
USP46P62068 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
USP46P62068 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP46P62068 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.64■□□□□ 0.57
USP46P62068 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.63■□□□□ 0.57
USP46P62068 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.63■□□□□ 0.57
USP46P62068 AC018470.1-201ENST00000624790 3129 ntBASIC18.63■□□□□ 0.57
USP46P62068 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.63■□□□□ 0.57
USP46P62068 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 SART3-203ENST00000546611 1184 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms