Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SMIM11AP58511 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.39■□□□□ 0.21
SMIM11AP58511 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 AP000523.1-201ENST00000398242 1049 ntBASIC16.39■□□□□ 0.21
SMIM11AP58511 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.39■□□□□ 0.21
SMIM11AP58511 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.39■□□□□ 0.21
SMIM11AP58511 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 Z99916.2-201ENST00000604037 246 ntBASIC16.39■□□□□ 0.21
SMIM11AP58511 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SMIM11AP58511 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.39■□□□□ 0.21
SMIM11AP58511 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.39■□□□□ 0.21
SMIM11AP58511 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMIM11AP58511 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.39■□□□□ 0.21
SMIM11AP58511 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SMIM11AP58511 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11AP58511 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMIM11AP58511 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.38■□□□□ 0.21
SMIM11AP58511 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
SMIM11AP58511 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 KRT18P65-201ENST00000439811 1286 ntBASIC16.38■□□□□ 0.21
SMIM11AP58511 AC009947.2-201ENST00000444014 672 ntBASIC16.38■□□□□ 0.21
SMIM11AP58511 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.38■□□□□ 0.21
SMIM11AP58511 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.38■□□□□ 0.21
SMIM11AP58511 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SMIM11AP58511 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SMIM11AP58511 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SMIM11AP58511 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMIM11AP58511 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.38■□□□□ 0.21
SMIM11AP58511 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.38■□□□□ 0.21
SMIM11AP58511 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.38■□□□□ 0.21
SMIM11AP58511 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 AC009949.1-201ENST00000623048 1830 ntBASIC16.38■□□□□ 0.21
SMIM11AP58511 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11AP58511 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMIM11AP58511 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SMIM11AP58511 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 AC016396.2-201ENST00000562575 1417 ntBASIC16.37■□□□□ 0.21
SMIM11AP58511 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.37■□□□□ 0.21
SMIM11AP58511 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SMIM11AP58511 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.37■□□□□ 0.21
SMIM11AP58511 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.37■□□□□ 0.21
SMIM11AP58511 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.37■□□□□ 0.21
SMIM11AP58511 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SMIM11AP58511 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.37■□□□□ 0.21
SMIM11AP58511 AL390955.1-201ENST00000428694 934 ntBASIC16.37■□□□□ 0.21
SMIM11AP58511 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.37■□□□□ 0.21
SMIM11AP58511 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SMIM11AP58511 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.37■□□□□ 0.21
SMIM11AP58511 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11AP58511 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SMIM11AP58511 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.36■□□□□ 0.21
SMIM11AP58511 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11AP58511 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11AP58511 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.36■□□□□ 0.21
SMIM11AP58511 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SMIM11AP58511 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SMIM11AP58511 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.36■□□□□ 0.21
SMIM11AP58511 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11AP58511 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11AP58511 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms