Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN2P57739 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN2P57739 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN2P57739 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN2P57739 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 AC009949.1-201ENST00000623048 1830 ntBASIC17.49■□□□□ 0.39
CLDN2P57739 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN2P57739 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN2P57739 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 AC103564.2-201ENST00000432853 1299 ntBASIC17.49■□□□□ 0.39
CLDN2P57739 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN2P57739 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CLDN2P57739 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 AC105339.3-201ENST00000560043 636 ntBASIC17.49■□□□□ 0.39
CLDN2P57739 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN2P57739 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 TERC-201ENST00000602385 541 ntBASIC17.49■□□□□ 0.39
CLDN2P57739 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLDN2P57739 GPALPP1-207ENST00000611650 899 ntBASIC17.49■□□□□ 0.39
CLDN2P57739 AC006538.3-201ENST00000612495 578 ntBASIC17.49■□□□□ 0.39
CLDN2P57739 AL022326.1-202ENST00000641533 845 ntBASIC17.49■□□□□ 0.39
CLDN2P57739 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CLDN2P57739 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN2P57739 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN2P57739 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLDN2P57739 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 AC090164.3-201ENST00000610780 2143 ntBASIC17.48■□□□□ 0.39
CLDN2P57739 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN2P57739 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLDN2P57739 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN2P57739 SPDYE21P-201ENST00000413323 827 ntBASIC17.48■□□□□ 0.39
CLDN2P57739 RNA5SP415-201ENST00000517246 115 ntBASIC17.48■□□□□ 0.39
CLDN2P57739 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN2P57739 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN2P57739 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN2P57739 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.48■□□□□ 0.39
CLDN2P57739 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN2P57739 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLDN2P57739 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CLDN2P57739 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLDN2P57739 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN2P57739 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLDN2P57739 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 AC009113.1-201ENST00000570267 2443 ntBASIC17.47■□□□□ 0.39
CLDN2P57739 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms