Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.23□□□□□ -0.29
CMC4P56277 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.23□□□□□ -0.29
CMC4P56277 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CMC4P56277 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.23□□□□□ -0.29
CMC4P56277 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.23□□□□□ -0.29
CMC4P56277 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.23□□□□□ -0.29
CMC4P56277 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.23□□□□□ -0.29
CMC4P56277 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 AC091304.2-201ENST00000564639 760 ntBASIC13.23□□□□□ -0.29
CMC4P56277 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.23□□□□□ -0.29
CMC4P56277 AC011467.2-201ENST00000598425 242 ntBASIC13.23□□□□□ -0.29
CMC4P56277 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CMC4P56277 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.23□□□□□ -0.29
CMC4P56277 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.23□□□□□ -0.29
CMC4P56277 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CMC4P56277 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 TP73-AS1-210ENST00000637775 1455 ntBASIC13.23□□□□□ -0.29
CMC4P56277 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CMC4P56277 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.22□□□□□ -0.29
CMC4P56277 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.22□□□□□ -0.29
CMC4P56277 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CMC4P56277 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.22□□□□□ -0.29
CMC4P56277 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CMC4P56277 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.22□□□□□ -0.29
CMC4P56277 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.22□□□□□ -0.29
CMC4P56277 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.22□□□□□ -0.29
CMC4P56277 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.22□□□□□ -0.29
CMC4P56277 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.22□□□□□ -0.29
CMC4P56277 AL591684.3-201ENST00000605187 298 ntBASIC13.22□□□□□ -0.29
CMC4P56277 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 AC114341.1-201ENST00000618070 349 ntBASIC13.22□□□□□ -0.29
CMC4P56277 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms