Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AF238378.1-201ENST00000526806 358 ntBASIC18.82■□□□□ 0.6
CACNA2D1P54289 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 AC104692.2-201ENST00000603054 253 ntBASIC18.82■□□□□ 0.6
CACNA2D1P54289 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CACNA2D1P54289 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 AC012313.1-201ENST00000593393 3059 ntBASIC18.81■□□□□ 0.6
CACNA2D1P54289 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA2D1P54289 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 AC004870.1-201ENST00000315132 882 ntBASIC18.81■□□□□ 0.6
CACNA2D1P54289 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 AC026396.1-201ENST00000419388 421 ntBASIC18.81■□□□□ 0.6
CACNA2D1P54289 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CACNA2D1P54289 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.81■□□□□ 0.6
CACNA2D1P54289 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNA2D1P54289 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CACNA2D1P54289 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA2D1P54289 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNA2D1P54289 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 AC096633.1-201ENST00000422446 749 ntBASIC18.8■□□□□ 0.6
CACNA2D1P54289 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CACNA2D1P54289 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA2D1P54289 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 AC022898.2-201ENST00000616822 1312 ntBASIC18.79■□□□□ 0.6
CACNA2D1P54289 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 AC009078.2-202ENST00000463353 338 ntBASIC18.79■□□□□ 0.6
CACNA2D1P54289 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 AP001269.4-201ENST00000609611 512 ntBASIC18.79■□□□□ 0.6
CACNA2D1P54289 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms