Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA2P51531 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC31.24■■■□□ 2.59
SMARCA2P51531 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA2P51531 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA2P51531 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA2P51531 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA2P51531 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA2P51531 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SMARCA2P51531 WRB-204ENST00000398753 699 ntTSL 3 BASIC31.24■■■□□ 2.59
SMARCA2P51531 SPDYE11-202ENST00000450699 704 ntBASIC31.24■■■□□ 2.59
SMARCA2P51531 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC31.24■■■□□ 2.59
SMARCA2P51531 SPDYE9P-201ENST00000570642 692 ntBASIC31.24■■■□□ 2.59
SMARCA2P51531 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA2P51531 SPDYE10P-202ENST00000612005 668 ntBASIC31.24■■■□□ 2.59
SMARCA2P51531 SPDYE8P-202ENST00000612377 668 ntBASIC31.24■■■□□ 2.59
SMARCA2P51531 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA2P51531 HARS-201ENST00000307633 1780 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA2P51531 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA2P51531 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA2P51531 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA2P51531 BX276092.7-203ENST00000637198 1536 ntBASIC31.24■■■□□ 2.59
SMARCA2P51531 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 AC002558.1-201ENST00000488906 803 ntBASIC31.23■■■□□ 2.59
SMARCA2P51531 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC31.23■■■□□ 2.59
SMARCA2P51531 TSFM-210ENST00000550559 897 ntTSL 5 BASIC31.23■■■□□ 2.59
SMARCA2P51531 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
SMARCA2P51531 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
SMARCA2P51531 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA2P51531 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC31.22■■■□□ 2.59
SMARCA2P51531 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA2P51531 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA2P51531 BASP1P1-201ENST00000430708 665 ntBASIC31.22■■■□□ 2.59
SMARCA2P51531 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC31.22■■■□□ 2.59
SMARCA2P51531 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC31.22■■■□□ 2.59
SMARCA2P51531 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA2P51531 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA2P51531 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC31.22■■■□□ 2.59
SMARCA2P51531 AC116562.4-201ENST00000641316 2276 ntBASIC31.22■■■□□ 2.59
SMARCA2P51531 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA2P51531 SP100-208ENST00000427101 1922 ntTSL 2 BASIC31.22■■■□□ 2.59
SMARCA2P51531 HNRNPFP1-201ENST00000391730 1133 ntBASIC31.22■■■□□ 2.59
SMARCA2P51531 TFAMP1-201ENST00000412727 736 ntBASIC31.22■■■□□ 2.59
SMARCA2P51531 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC31.22■■■□□ 2.59
SMARCA2P51531 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC31.22■■■□□ 2.59
SMARCA2P51531 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA2P51531 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA2P51531 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
SMARCA2P51531 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC31.21■■■□□ 2.59
SMARCA2P51531 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA2P51531 PI4KAP1-204ENST00000612579 1703 ntBASIC31.21■■■□□ 2.59
SMARCA2P51531 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC31.21■■■□□ 2.59
SMARCA2P51531 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA2P51531 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC31.21■■■□□ 2.59
SMARCA2P51531 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA2P51531 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA2P51531 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC31.21■■■□□ 2.59
SMARCA2P51531 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC31.21■■■□□ 2.59
SMARCA2P51531 THTPA-204ENST00000554970 569 ntTSL 4 BASIC31.21■■■□□ 2.59
SMARCA2P51531 THTPA-206ENST00000556015 535 ntTSL 3 BASIC31.21■■■□□ 2.59
SMARCA2P51531 INO80E-210ENST00000567705 880 ntTSL 3 BASIC31.21■■■□□ 2.59
SMARCA2P51531 AC008761.3-201ENST00000624803 892 ntBASIC31.21■■■□□ 2.59
SMARCA2P51531 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCA2P51531 AC100803.2-201ENST00000562459 1963 ntBASIC31.2■■■□□ 2.59
SMARCA2P51531 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC31.2■■■□□ 2.59
SMARCA2P51531 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCA2P51531 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC31.2■■■□□ 2.59
SMARCA2P51531 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
SMARCA2P51531 INGX-202ENST00000489074 768 ntBASIC31.2■■■□□ 2.58
SMARCA2P51531 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC31.2■■■□□ 2.58
SMARCA2P51531 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC31.2■■■□□ 2.58
SMARCA2P51531 BSG-214ENST00000614867 960 ntTSL 3 BASIC31.2■■■□□ 2.58
SMARCA2P51531 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SMARCA2P51531 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SMARCA2P51531 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SMARCA2P51531 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SMARCA2P51531 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC31.2■■■□□ 2.58
SMARCA2P51531 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC31.19■■■□□ 2.58
SMARCA2P51531 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCA2P51531 GK-202ENST00000378941 458 ntTSL 3 BASIC31.19■■■□□ 2.58
SMARCA2P51531 TSPY16P-201ENST00000449843 468 ntBASIC31.19■■■□□ 2.58
SMARCA2P51531 AC087163.2-201ENST00000457299 853 ntBASIC31.19■■■□□ 2.58
SMARCA2P51531 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC31.19■■■□□ 2.58
SMARCA2P51531 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCA2P51531 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC31.19■■■□□ 2.58
SMARCA2P51531 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC31.19■■■□□ 2.58
SMARCA2P51531 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC31.19■■■□□ 2.58
SMARCA2P51531 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC31.19■■■□□ 2.58
SMARCA2P51531 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC31.19■■■□□ 2.58
SMARCA2P51531 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms