Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6CP51160 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.21■□□□□ 0.67
PDE6CP51160 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.21■□□□□ 0.67
PDE6CP51160 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PDE6CP51160 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDE6CP51160 DUSP5P1-201ENST00000441325 1139 ntBASIC19.21■□□□□ 0.67
PDE6CP51160 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE6CP51160 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.21■□□□□ 0.67
PDE6CP51160 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.21■□□□□ 0.67
PDE6CP51160 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.21■□□□□ 0.67
PDE6CP51160 AC090616.6-201ENST00000582640 721 ntBASIC19.21■□□□□ 0.67
PDE6CP51160 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.21■□□□□ 0.67
PDE6CP51160 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDE6CP51160 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDE6CP51160 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.21■□□□□ 0.67
PDE6CP51160 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDE6CP51160 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6CP51160 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PDE6CP51160 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6CP51160 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE6CP51160 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6CP51160 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6CP51160 KRT18P65-201ENST00000439811 1286 ntBASIC19.2■□□□□ 0.66
PDE6CP51160 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE6CP51160 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.2■□□□□ 0.66
PDE6CP51160 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.2■□□□□ 0.66
PDE6CP51160 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PDE6CP51160 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.2■□□□□ 0.66
PDE6CP51160 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6CP51160 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6CP51160 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE6CP51160 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE6CP51160 PKD1P1-201ENST00000458669 6805 ntBASIC19.2■□□□□ 0.66
PDE6CP51160 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDE6CP51160 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PDE6CP51160 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDE6CP51160 Z83836.1-201ENST00000624605 1642 ntBASIC19.19■□□□□ 0.66
PDE6CP51160 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE6CP51160 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.19■□□□□ 0.66
PDE6CP51160 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.19■□□□□ 0.66
PDE6CP51160 PRELID1P1-202ENST00000567272 903 ntBASIC19.19■□□□□ 0.66
PDE6CP51160 AP002414.4-201ENST00000589764 1148 ntBASIC19.19■□□□□ 0.66
PDE6CP51160 AC005332.3-201ENST00000589904 676 ntBASIC19.19■□□□□ 0.66
PDE6CP51160 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE6CP51160 GPR32P1-201ENST00000601788 811 ntBASIC19.19■□□□□ 0.66
PDE6CP51160 AC004263.2-201ENST00000617183 678 ntBASIC19.19■□□□□ 0.66
PDE6CP51160 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE6CP51160 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE6CP51160 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 KRT18P1-202ENST00000452408 1331 ntBASIC19.19■□□□□ 0.66
PDE6CP51160 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
PDE6CP51160 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PDE6CP51160 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6CP51160 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE6CP51160 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6CP51160 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6CP51160 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.18■□□□□ 0.66
PDE6CP51160 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE6CP51160 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PDE6CP51160 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6CP51160 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PDE6CP51160 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.18■□□□□ 0.66
PDE6CP51160 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6CP51160 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6CP51160 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6CP51160 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms