Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.93■□□□□ 0.3
PRIM2P49643 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRIM2P49643 TERF1P1-201ENST00000311003 1181 ntBASIC16.92■□□□□ 0.3
PRIM2P49643 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.92■□□□□ 0.3
PRIM2P49643 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.92■□□□□ 0.3
PRIM2P49643 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.92■□□□□ 0.3
PRIM2P49643 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRIM2P49643 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
PRIM2P49643 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PRIM2P49643 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PRIM2P49643 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.92■□□□□ 0.3
PRIM2P49643 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.92■□□□□ 0.3
PRIM2P49643 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRIM2P49643 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PRIM2P49643 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRIM2P49643 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRIM2P49643 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.91■□□□□ 0.3
PRIM2P49643 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.91■□□□□ 0.3
PRIM2P49643 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PRIM2P49643 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.91■□□□□ 0.3
PRIM2P49643 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRIM2P49643 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PRIM2P49643 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.91■□□□□ 0.3
PRIM2P49643 RASA4DP-201ENST00000460726 1199 ntBASIC16.91■□□□□ 0.3
PRIM2P49643 DUTP2-201ENST00000519164 463 ntBASIC16.91■□□□□ 0.3
PRIM2P49643 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PRIM2P49643 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PRIM2P49643 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PRIM2P49643 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRIM2P49643 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRIM2P49643 AC022898.2-201ENST00000616822 1312 ntBASIC16.91■□□□□ 0.3
PRIM2P49643 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRIM2P49643 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.91■□□□□ 0.3
PRIM2P49643 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PRIM2P49643 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 AC005521.1-201ENST00000393351 872 ntBASIC16.9■□□□□ 0.3
PRIM2P49643 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PRIM2P49643 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.9■□□□□ 0.3
PRIM2P49643 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 AL441883.1-201ENST00000566170 1045 ntBASIC16.9■□□□□ 0.3
PRIM2P49643 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.9■□□□□ 0.3
PRIM2P49643 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.9■□□□□ 0.3
PRIM2P49643 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PRIM2P49643 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRIM2P49643 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRIM2P49643 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms