Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UBE2AP49459 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2AP49459 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
UBE2AP49459 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC11.3□□□□□ -0.6
UBE2AP49459 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC11.3□□□□□ -0.6
UBE2AP49459 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UBE2AP49459 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 KRT18P22-201ENST00000402024 1347 ntBASIC11.3□□□□□ -0.6
UBE2AP49459 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UBE2AP49459 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 AC138028.4-201ENST00000564984 1845 ntBASIC11.3□□□□□ -0.6
UBE2AP49459 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UBE2AP49459 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UBE2AP49459 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2AP49459 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
UBE2AP49459 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.29□□□□□ -0.6
UBE2AP49459 LINC01568-207ENST00000641790 1380 ntBASIC11.29□□□□□ -0.6
UBE2AP49459 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2AP49459 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 CD276-203ENST00000537340 2439 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 PXK-206ENST00000463280 2825 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 ILF2-202ENST00000368681 726 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.29□□□□□ -0.6
UBE2AP49459 ATP5G1P1-201ENST00000448724 379 ntBASIC11.29□□□□□ -0.6
UBE2AP49459 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 AC104390.1-201ENST00000555663 520 ntBASIC11.29□□□□□ -0.6
UBE2AP49459 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2AP49459 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.29□□□□□ -0.6
UBE2AP49459 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 MIR3180-4-201ENST00000582223 153 ntBASIC11.29□□□□□ -0.6
UBE2AP49459 AC010240.3-201ENST00000607688 395 ntBASIC11.29□□□□□ -0.6
UBE2AP49459 AC024243.1-201ENST00000609234 778 ntBASIC11.29□□□□□ -0.6
UBE2AP49459 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
UBE2AP49459 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2AP49459 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 GNAS-203ENST00000306120 1878 ntBASIC11.29□□□□□ -0.6
UBE2AP49459 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2AP49459 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
UBE2AP49459 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
UBE2AP49459 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
UBE2AP49459 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2AP49459 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
UBE2AP49459 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2AP49459 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2AP49459 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 AL096828.2-201ENST00000567259 1965 ntBASIC11.28□□□□□ -0.6
UBE2AP49459 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms