Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-1P43699 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-1P43699 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-1P43699 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.56□□□□□ -0.08
NKX2-1P43699 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NKX2-1P43699 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX2-1P43699 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
NKX2-1P43699 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NKX2-1P43699 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX2-1P43699 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NKX2-1P43699 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NKX2-1P43699 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 PCDHA14-201ENST00000506751 2298 ntBASIC14.56□□□□□ -0.08
NKX2-1P43699 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NKX2-1P43699 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 AL353807.1-201ENST00000427475 662 ntBASIC14.56□□□□□ -0.08
NKX2-1P43699 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.56□□□□□ -0.08
NKX2-1P43699 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
NKX2-1P43699 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.56□□□□□ -0.08
NKX2-1P43699 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.56□□□□□ -0.08
NKX2-1P43699 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NKX2-1P43699 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX2-1P43699 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NKX2-1P43699 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX2-1P43699 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 KRT8P7-201ENST00000533003 1432 ntBASIC14.56□□□□□ -0.08
NKX2-1P43699 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 AC105020.1-201ENST00000435356 2205 ntBASIC14.56□□□□□ -0.08
NKX2-1P43699 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-1P43699 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NKX2-1P43699 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-1P43699 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-1P43699 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 AL024508.2-201ENST00000607749 1894 ntBASIC14.55□□□□□ -0.08
NKX2-1P43699 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX2-1P43699 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 AC233263.1-201ENST00000578059 224 ntBASIC14.55□□□□□ -0.08
NKX2-1P43699 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 AC124016.1-201ENST00000609552 612 ntBASIC14.55□□□□□ -0.08
NKX2-1P43699 MIR6786-201ENST00000616843 113 ntBASIC14.55□□□□□ -0.08
NKX2-1P43699 LINC01451-201ENST00000623792 534 ntBASIC14.55□□□□□ -0.08
NKX2-1P43699 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-1P43699 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-1P43699 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-1P43699 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NKX2-1P43699 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-1P43699 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NKX2-1P43699 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-1P43699 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms