Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC1P35251 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC1P35251 OR6D1P-202ENST00000641007 5290 ntBASIC18.74■□□□□ 0.59
RFC1P35251 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC1P35251 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC1P35251 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RFC1P35251 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFC1P35251 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC1P35251 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFC1P35251 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.74■□□□□ 0.59
RFC1P35251 AC005332.1-201ENST00000577698 1310 ntBASIC18.74■□□□□ 0.59
RFC1P35251 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
RFC1P35251 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC1P35251 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RFC1P35251 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.73■□□□□ 0.59
RFC1P35251 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.73■□□□□ 0.59
RFC1P35251 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC1P35251 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC1P35251 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RFC1P35251 AC116407.2-201ENST00000613639 860 ntBASIC18.73■□□□□ 0.59
RFC1P35251 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RFC1P35251 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RFC1P35251 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RFC1P35251 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RFC1P35251 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC1P35251 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFC1P35251 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC1P35251 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC1P35251 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC1P35251 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFC1P35251 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC1P35251 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC1P35251 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC1P35251 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC1P35251 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.72■□□□□ 0.59
RFC1P35251 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
RFC1P35251 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC1P35251 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC1P35251 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RFC1P35251 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC1P35251 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RFC1P35251 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.71■□□□□ 0.59
RFC1P35251 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.71■□□□□ 0.59
RFC1P35251 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RFC1P35251 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RFC1P35251 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC1P35251 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC1P35251 RN7SL606P-201ENST00000472779 293 ntBASIC18.71■□□□□ 0.59
RFC1P35251 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.71■□□□□ 0.59
RFC1P35251 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.71■□□□□ 0.59
RFC1P35251 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.71■□□□□ 0.59
RFC1P35251 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.71■□□□□ 0.59
RFC1P35251 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC1P35251 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC1P35251 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
RFC1P35251 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC1P35251 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms