Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHRNA3P32297 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA3P32297 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.74■□□□□ 0.59
CHRNA3P32297 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CHRNA3P32297 AC079602.3-201ENST00000623931 403 ntBASIC18.74■□□□□ 0.59
CHRNA3P32297 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA3P32297 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 AD000864.1-201ENST00000624076 2295 ntBASIC18.74■□□□□ 0.59
CHRNA3P32297 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 AP001094.4-201ENST00000579008 2176 ntBASIC18.74■□□□□ 0.59
CHRNA3P32297 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 LINC00602-201ENST00000629776 2065 ntBASIC18.73■□□□□ 0.59
CHRNA3P32297 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHRNA3P32297 AC099398.1-201ENST00000567919 2776 ntBASIC18.73■□□□□ 0.59
CHRNA3P32297 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.73■□□□□ 0.59
CHRNA3P32297 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHRNA3P32297 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRNA3P32297 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRNA3P32297 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.73■□□□□ 0.59
CHRNA3P32297 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.73■□□□□ 0.59
CHRNA3P32297 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.73■□□□□ 0.59
CHRNA3P32297 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.73■□□□□ 0.59
CHRNA3P32297 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHRNA3P32297 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA3P32297 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHRNA3P32297 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRNA3P32297 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRNA3P32297 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.73■□□□□ 0.59
CHRNA3P32297 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA3P32297 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA3P32297 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA3P32297 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.72■□□□□ 0.59
CHRNA3P32297 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.72■□□□□ 0.59
CHRNA3P32297 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA3P32297 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA3P32297 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHRNA3P32297 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.72■□□□□ 0.59
CHRNA3P32297 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHRNA3P32297 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.72■□□□□ 0.59
CHRNA3P32297 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA3P32297 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHRNA3P32297 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA3P32297 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA3P32297 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRNA3P32297 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CHRNA3P32297 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHRNA3P32297 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHRNA3P32297 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRNA3P32297 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CHRNA3P32297 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA3P32297 AC132938.6-201ENST00000623828 1655 ntBASIC18.71■□□□□ 0.59
CHRNA3P32297 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms