Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 IGLL3P-201ENST00000412472 434 ntBASIC19.67■□□□□ 0.74
SMPD1P17405 DDX43P3-201ENST00000441064 443 ntBASIC19.67■□□□□ 0.74
SMPD1P17405 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.67■□□□□ 0.74
SMPD1P17405 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.67■□□□□ 0.74
SMPD1P17405 AL805961.1-202ENST00000641562 540 ntBASIC19.67■□□□□ 0.74
SMPD1P17405 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMPD1P17405 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.67■□□□□ 0.74
SMPD1P17405 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD1P17405 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.67■□□□□ 0.74
SMPD1P17405 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.67■□□□□ 0.74
SMPD1P17405 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMPD1P17405 AC009336.1-201ENST00000608941 1553 ntBASIC19.66■□□□□ 0.74
SMPD1P17405 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SMPD1P17405 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 PTCHD3P3-201ENST00000403073 906 ntBASIC19.66■□□□□ 0.74
SMPD1P17405 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
SMPD1P17405 IGHV3-52-201ENST00000519770 353 ntBASIC19.66■□□□□ 0.74
SMPD1P17405 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.66■□□□□ 0.74
SMPD1P17405 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SMPD1P17405 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SMPD1P17405 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD1P17405 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.66■□□□□ 0.74
SMPD1P17405 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SMPD1P17405 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD1P17405 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.66■□□□□ 0.74
SMPD1P17405 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMPD1P17405 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
SMPD1P17405 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD1P17405 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SMPD1P17405 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD1P17405 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD1P17405 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD1P17405 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.65■□□□□ 0.74
SMPD1P17405 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.65■□□□□ 0.74
SMPD1P17405 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SMPD1P17405 C20orf181-201ENST00000623918 480 ntBASIC19.65■□□□□ 0.74
SMPD1P17405 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.65■□□□□ 0.74
SMPD1P17405 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.65■□□□□ 0.74
SMPD1P17405 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD1P17405 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD1P17405 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD1P17405 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD1P17405 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.64■□□□□ 0.74
SMPD1P17405 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.64■□□□□ 0.74
SMPD1P17405 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.64■□□□□ 0.73
SMPD1P17405 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.64■□□□□ 0.73
SMPD1P17405 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SMPD1P17405 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.64■□□□□ 0.73
SMPD1P17405 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SMPD1P17405 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SMPD1P17405 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.64■□□□□ 0.73
SMPD1P17405 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.64■□□□□ 0.73
SMPD1P17405 AL353135.1-201ENST00000606729 504 ntBASIC19.64■□□□□ 0.73
SMPD1P17405 KRT18P28-201ENST00000453838 1332 ntBASIC19.64■□□□□ 0.73
SMPD1P17405 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 GPR89P-201ENST00000407924 1495 ntBASIC19.64■□□□□ 0.73
SMPD1P17405 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.64■□□□□ 0.73
SMPD1P17405 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.64■□□□□ 0.73
SMPD1P17405 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.64■□□□□ 0.73
SMPD1P17405 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SMPD1P17405 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 REXO1L9P-201ENST00000604264 2108 ntBASIC19.64■□□□□ 0.73
SMPD1P17405 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
SMPD1P17405 AP000997.3-201ENST00000623333 2250 ntBASIC19.64■□□□□ 0.73
SMPD1P17405 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SMPD1P17405 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SMPD1P17405 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD1P17405 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 AL020996.1-203ENST00000536896 2307 ntBASIC19.63■□□□□ 0.73
SMPD1P17405 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.63■□□□□ 0.73
SMPD1P17405 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.63■□□□□ 0.73
SMPD1P17405 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms