Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 LINC00602-201ENST00000629776 2065 ntBASIC16.58■□□□□ 0.24
TPRP12270 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TPRP12270 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 TSSK5P-201ENST00000423978 907 ntBASIC16.57■□□□□ 0.24
TPRP12270 GPS2P2-201ENST00000430745 888 ntBASIC16.57■□□□□ 0.24
TPRP12270 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.57■□□□□ 0.24
TPRP12270 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.57■□□□□ 0.24
TPRP12270 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.57■□□□□ 0.24
TPRP12270 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.57■□□□□ 0.24
TPRP12270 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 AC138969.3-201ENST00000546612 1459 ntBASIC16.57■□□□□ 0.24
TPRP12270 AC138932.2-201ENST00000548268 1459 ntBASIC16.57■□□□□ 0.24
TPRP12270 AC126755.4-201ENST00000549796 1459 ntBASIC16.57■□□□□ 0.24
TPRP12270 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.57■□□□□ 0.24
TPRP12270 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TPRP12270 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.57■□□□□ 0.24
TPRP12270 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
TPRP12270 SPDYE11-202ENST00000450699 704 ntBASIC16.57■□□□□ 0.24
TPRP12270 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 SPDYE9P-201ENST00000570642 692 ntBASIC16.57■□□□□ 0.24
TPRP12270 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.57■□□□□ 0.24
TPRP12270 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.57■□□□□ 0.24
TPRP12270 SPDYE10P-202ENST00000612005 668 ntBASIC16.57■□□□□ 0.24
TPRP12270 SPDYE8P-202ENST00000612377 668 ntBASIC16.57■□□□□ 0.24
TPRP12270 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TPRP12270 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.57■□□□□ 0.24
TPRP12270 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPRP12270 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
TPRP12270 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPRP12270 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TPRP12270 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TPRP12270 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TPRP12270 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.56■□□□□ 0.24
TPRP12270 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TPRP12270 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TPRP12270 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.56■□□□□ 0.24
TPRP12270 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 DGCR5-201ENST00000399539 862 ntBASIC16.56■□□□□ 0.24
TPRP12270 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPRP12270 RNA5SP423-201ENST00000517127 109 ntBASIC16.56■□□□□ 0.24
TPRP12270 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.56■□□□□ 0.24
TPRP12270 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.56■□□□□ 0.24
TPRP12270 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.56■□□□□ 0.24
TPRP12270 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.56■□□□□ 0.24
TPRP12270 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPRP12270 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.55■□□□□ 0.24
TPRP12270 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPRP12270 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPRP12270 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPRP12270 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPRP12270 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPRP12270 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.55■□□□□ 0.24
TPRP12270 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPRP12270 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TPRP12270 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.55■□□□□ 0.24
TPRP12270 RPS15P9-201ENST00000494093 319 ntBASIC16.55■□□□□ 0.24
TPRP12270 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.55■□□□□ 0.24
TPRP12270 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.55■□□□□ 0.24
TPRP12270 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.55■□□□□ 0.24
TPRP12270 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.55■□□□□ 0.24
TPRP12270 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TPRP12270 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms