Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
EPB41P11171 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
EPB41P11171 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
EPB41P11171 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
EPB41P11171 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.5■□□□□ 0.71
EPB41P11171 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.5■□□□□ 0.71
EPB41P11171 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.5■□□□□ 0.71
EPB41P11171 DDX43P3-201ENST00000441064 443 ntBASIC19.5■□□□□ 0.71
EPB41P11171 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.5■□□□□ 0.71
EPB41P11171 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.5■□□□□ 0.71
EPB41P11171 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
EPB41P11171 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
EPB41P11171 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.5■□□□□ 0.71
EPB41P11171 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
EPB41P11171 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
EPB41P11171 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.5■□□□□ 0.71
EPB41P11171 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.5■□□□□ 0.71
EPB41P11171 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.5■□□□□ 0.71
EPB41P11171 AL355312.1-201ENST00000407115 2176 ntBASIC19.5■□□□□ 0.71
EPB41P11171 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.5■□□□□ 0.71
EPB41P11171 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
EPB41P11171 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.5■□□□□ 0.71
EPB41P11171 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.5■□□□□ 0.71
EPB41P11171 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPB41P11171 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.49■□□□□ 0.71
EPB41P11171 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
EPB41P11171 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.49■□□□□ 0.71
EPB41P11171 AC012313.1-201ENST00000593393 3059 ntBASIC19.49■□□□□ 0.71
EPB41P11171 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.49■□□□□ 0.71
EPB41P11171 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.49■□□□□ 0.71
EPB41P11171 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.49■□□□□ 0.71
EPB41P11171 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
EPB41P11171 MTCL1P1-201ENST00000446207 792 ntBASIC19.49■□□□□ 0.71
EPB41P11171 AC068472.1-201ENST00000474589 881 ntBASIC19.49■□□□□ 0.71
EPB41P11171 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.49■□□□□ 0.71
EPB41P11171 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.49■□□□□ 0.71
EPB41P11171 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.49■□□□□ 0.71
EPB41P11171 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
EPB41P11171 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.49■□□□□ 0.71
EPB41P11171 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.49■□□□□ 0.71
EPB41P11171 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
EPB41P11171 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
EPB41P11171 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.49■□□□□ 0.71
EPB41P11171 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPB41P11171 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
EPB41P11171 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
EPB41P11171 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
EPB41P11171 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EPB41P11171 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.48■□□□□ 0.71
EPB41P11171 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
EPB41P11171 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
EPB41P11171 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
EPB41P11171 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
EPB41P11171 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.48■□□□□ 0.71
EPB41P11171 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EPB41P11171 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
EPB41P11171 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.48■□□□□ 0.71
EPB41P11171 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPB41P11171 AL049597.2-201ENST00000565575 961 ntBASIC19.48■□□□□ 0.71
EPB41P11171 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.48■□□□□ 0.71
EPB41P11171 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.48■□□□□ 0.71
EPB41P11171 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EPB41P11171 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.48■□□□□ 0.71
EPB41P11171 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
EPB41P11171 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms