Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.4■□□□□ 0.7
COL1A2P08123 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL1A2P08123 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A2P08123 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.39■□□□□ 0.7
COL1A2P08123 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
COL1A2P08123 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A2P08123 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COL1A2P08123 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COL1A2P08123 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.39■□□□□ 0.69
COL1A2P08123 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.39■□□□□ 0.69
COL1A2P08123 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A2P08123 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.39■□□□□ 0.69
COL1A2P08123 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.39■□□□□ 0.69
COL1A2P08123 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL1A2P08123 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A2P08123 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
COL1A2P08123 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A2P08123 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A2P08123 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL1A2P08123 PGAM5P1-201ENST00000518923 814 ntBASIC19.39■□□□□ 0.69
COL1A2P08123 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COL1A2P08123 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A2P08123 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A2P08123 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
COL1A2P08123 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A2P08123 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A2P08123 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.38■□□□□ 0.69
COL1A2P08123 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A2P08123 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A2P08123 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
COL1A2P08123 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A2P08123 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A2P08123 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
COL1A2P08123 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A2P08123 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.38■□□□□ 0.69
COL1A2P08123 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
COL1A2P08123 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL1A2P08123 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL1A2P08123 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.37■□□□□ 0.69
COL1A2P08123 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.37■□□□□ 0.69
COL1A2P08123 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.37■□□□□ 0.69
COL1A2P08123 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.37■□□□□ 0.69
COL1A2P08123 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
COL1A2P08123 AC006538.3-201ENST00000612495 578 ntBASIC19.37■□□□□ 0.69
COL1A2P08123 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COL1A2P08123 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.37■□□□□ 0.69
COL1A2P08123 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
COL1A2P08123 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL1A2P08123 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 AC006504.4-201ENST00000592118 1568 ntBASIC19.37■□□□□ 0.69
COL1A2P08123 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL1A2P08123 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.37■□□□□ 0.69
COL1A2P08123 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A2P08123 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COL1A2P08123 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL1A2P08123 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL1A2P08123 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 KRT18P13-201ENST00000400056 1290 ntBASIC19.36■□□□□ 0.69
COL1A2P08123 MIR940-201ENST00000401276 94 ntBASIC19.36■□□□□ 0.69
COL1A2P08123 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.36■□□□□ 0.69
COL1A2P08123 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.36■□□□□ 0.69
COL1A2P08123 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.36■□□□□ 0.69
COL1A2P08123 AC108751.1-201ENST00000490852 363 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms