Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.69■□□□□ 0.58
RB1P06400 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.69■□□□□ 0.58
RB1P06400 STK19B-204ENST00000512515 211 ntBASIC18.69■□□□□ 0.58
RB1P06400 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.69■□□□□ 0.58
RB1P06400 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RB1P06400 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.69■□□□□ 0.58
RB1P06400 AC004449.1-201ENST00000564240 433 ntBASIC18.69■□□□□ 0.58
RB1P06400 OR7E47P-204ENST00000575924 449 ntBASIC18.69■□□□□ 0.58
RB1P06400 STK25P1-201ENST00000585406 838 ntBASIC18.69■□□□□ 0.58
RB1P06400 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.69■□□□□ 0.58
RB1P06400 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.69■□□□□ 0.58
RB1P06400 AL353135.1-201ENST00000606729 504 ntBASIC18.69■□□□□ 0.58
RB1P06400 AL513210.1-201ENST00000629608 234 ntBASIC18.69■□□□□ 0.58
RB1P06400 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.69■□□□□ 0.58
RB1P06400 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.69■□□□□ 0.58
RB1P06400 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.69■□□□□ 0.58
RB1P06400 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.68■□□□□ 0.58
RB1P06400 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.68■□□□□ 0.58
RB1P06400 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.68■□□□□ 0.58
RB1P06400 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RB1P06400 AC109462.3-201ENST00000573934 613 ntBASIC18.68■□□□□ 0.58
RB1P06400 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
RB1P06400 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RB1P06400 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.68■□□□□ 0.58
RB1P06400 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RB1P06400 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.67■□□□□ 0.58
RB1P06400 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RB1P06400 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RB1P06400 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.67■□□□□ 0.58
RB1P06400 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RB1P06400 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.67■□□□□ 0.58
RB1P06400 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.67■□□□□ 0.58
RB1P06400 HLA-J-203ENST00000494367 1087 ntBASIC18.67■□□□□ 0.58
RB1P06400 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.67■□□□□ 0.58
RB1P06400 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.67■□□□□ 0.58
RB1P06400 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.67■□□□□ 0.58
RB1P06400 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 AC116407.2-201ENST00000613639 860 ntBASIC18.67■□□□□ 0.58
RB1P06400 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RB1P06400 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RB1P06400 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RB1P06400 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 AC097637.2-201ENST00000624096 1997 ntBASIC18.66■□□□□ 0.58
RB1P06400 AC116562.4-201ENST00000641316 2276 ntBASIC18.66■□□□□ 0.58
RB1P06400 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.66■□□□□ 0.58
RB1P06400 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RB1P06400 COX20P2-201ENST00000452636 358 ntBASIC18.66■□□□□ 0.58
RB1P06400 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.66■□□□□ 0.58
RB1P06400 IGHV3-52-201ENST00000519770 353 ntBASIC18.66■□□□□ 0.58
RB1P06400 AC025678.2-201ENST00000562061 970 ntBASIC18.66■□□□□ 0.58
RB1P06400 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.66■□□□□ 0.58
RB1P06400 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.66■□□□□ 0.58
RB1P06400 AC091812.2-201ENST00000619081 385 ntBASIC18.66■□□□□ 0.58
RB1P06400 AC105339.1-204ENST00000636249 355 ntBASIC18.66■□□□□ 0.58
RB1P06400 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.66■□□□□ 0.58
RB1P06400 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.66■□□□□ 0.58
RB1P06400 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RB1P06400 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RB1P06400 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.65■□□□□ 0.58
RB1P06400 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RB1P06400 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RB1P06400 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms