Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPNS1P04632 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPNS1P04632 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPNS1P04632 AC138028.4-201ENST00000564984 1845 ntBASIC17.68■□□□□ 0.42
CAPNS1P04632 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPNS1P04632 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.68■□□□□ 0.42
CAPNS1P04632 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPNS1P04632 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.68■□□□□ 0.42
CAPNS1P04632 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.68■□□□□ 0.42
CAPNS1P04632 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 AC112497.1-201ENST00000624824 639 ntBASIC17.68■□□□□ 0.42
CAPNS1P04632 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPNS1P04632 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPNS1P04632 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CAPNS1P04632 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPNS1P04632 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPNS1P04632 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CAPNS1P04632 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CAPNS1P04632 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPNS1P04632 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CAPNS1P04632 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CAPNS1P04632 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPNS1P04632 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.67■□□□□ 0.42
CAPNS1P04632 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPNS1P04632 AC091607.1-201ENST00000490318 1060 ntBASIC17.67■□□□□ 0.42
CAPNS1P04632 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.67■□□□□ 0.42
CAPNS1P04632 MIR3180-5-201ENST00000583743 153 ntBASIC17.67■□□□□ 0.42
CAPNS1P04632 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
CAPNS1P04632 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPNS1P04632 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CAPNS1P04632 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CAPNS1P04632 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPNS1P04632 AC093677.2-201ENST00000600169 1863 ntBASIC17.67■□□□□ 0.42
CAPNS1P04632 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CAPNS1P04632 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CAPNS1P04632 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPNS1P04632 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CAPNS1P04632 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CAPNS1P04632 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 NUS1P2-201ENST00000417358 873 ntBASIC17.66■□□□□ 0.42
CAPNS1P04632 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.66■□□□□ 0.42
CAPNS1P04632 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.66■□□□□ 0.42
CAPNS1P04632 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CAPNS1P04632 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.66■□□□□ 0.42
CAPNS1P04632 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPNS1P04632 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPNS1P04632 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms