Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 COX5BP2-201ENST00000392354 334 ntBASIC19.1■□□□□ 0.65
HLA-DRAP01903 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 HCG4P8-203ENST00000443049 980 ntBASIC19.1■□□□□ 0.65
HLA-DRAP01903 MINOS1P3-201ENST00000457048 203 ntBASIC19.1■□□□□ 0.65
HLA-DRAP01903 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 AC104819.1-201ENST00000504587 486 ntBASIC19.1■□□□□ 0.65
HLA-DRAP01903 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 AC012615.1-201ENST00000565797 1299 ntBASIC19.1■□□□□ 0.65
HLA-DRAP01903 BNIP3P18-201ENST00000593976 575 ntBASIC19.1■□□□□ 0.65
HLA-DRAP01903 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DRAP01903 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DRAP01903 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DRAP01903 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DRAP01903 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 LINC00896-202ENST00000609602 2128 ntBASIC19.09■□□□□ 0.65
HLA-DRAP01903 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DRAP01903 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HLA-DRAP01903 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.08■□□□□ 0.65
HLA-DRAP01903 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.08■□□□□ 0.65
HLA-DRAP01903 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.08■□□□□ 0.65
HLA-DRAP01903 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.08■□□□□ 0.65
HLA-DRAP01903 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HLA-DRAP01903 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DRAP01903 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DRAP01903 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.08■□□□□ 0.65
HLA-DRAP01903 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.08■□□□□ 0.65
HLA-DRAP01903 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRAP01903 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRAP01903 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRAP01903 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRAP01903 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 AC009533.2-201ENST00000543664 586 ntBASIC19.08■□□□□ 0.64
HLA-DRAP01903 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRAP01903 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRAP01903 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DRAP01903 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DRAP01903 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRAP01903 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRAP01903 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRAP01903 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRAP01903 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRAP01903 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRAP01903 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRAP01903 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DRAP01903 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
HLA-DRAP01903 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms