Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 KLF2P3-201ENST00000451977 1087 ntBASIC20.12■□□□□ 0.81
ALDH1A1P00352 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 IGHV3-52-201ENST00000519770 353 ntBASIC20.12■□□□□ 0.81
ALDH1A1P00352 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 AP001059.3-201ENST00000619053 235 ntBASIC20.12■□□□□ 0.81
ALDH1A1P00352 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 AL049812.1-201ENST00000432563 2267 ntBASIC20.11■□□□□ 0.81
ALDH1A1P00352 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 AC093484.2-201ENST00000580996 2166 ntBASIC20.11■□□□□ 0.81
ALDH1A1P00352 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 DUX4L17-201ENST00000557360 1267 ntBASIC20.11■□□□□ 0.81
ALDH1A1P00352 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 AC027307.3-201ENST00000594262 1100 ntBASIC20.11■□□□□ 0.81
ALDH1A1P00352 AC008761.3-201ENST00000624803 892 ntBASIC20.11■□□□□ 0.81
ALDH1A1P00352 AC009336.1-201ENST00000608941 1553 ntBASIC20.11■□□□□ 0.81
ALDH1A1P00352 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALDH1A1P00352 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.11■□□□□ 0.81
ALDH1A1P00352 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALDH1A1P00352 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALDH1A1P00352 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALDH1A1P00352 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALDH1A1P00352 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ALDH1A1P00352 AC107890.1-201ENST00000422478 521 ntBASIC20.1■□□□□ 0.81
ALDH1A1P00352 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 AL592309.1-201ENST00000443127 649 ntBASIC20.1■□□□□ 0.81
ALDH1A1P00352 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ALDH1A1P00352 RN7SL589P-201ENST00000481268 310 ntBASIC20.1■□□□□ 0.81
ALDH1A1P00352 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 CR383656.12-201ENST00000549567 513 ntBASIC20.1■□□□□ 0.81
ALDH1A1P00352 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 LINC02560-201ENST00000596379 459 ntBASIC20.1■□□□□ 0.81
ALDH1A1P00352 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 ESPNP-201ENST00000270691 2015 ntBASIC20.1■□□□□ 0.81
ALDH1A1P00352 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALDH1A1P00352 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALDH1A1P00352 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ALDH1A1P00352 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 AC093010.1-201ENST00000473625 1624 ntBASIC20.09■□□□□ 0.81
ALDH1A1P00352 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 AL359881.2-201ENST00000602973 570 ntBASIC20.09■□□□□ 0.81
ALDH1A1P00352 AL008721.1-201ENST00000609964 604 ntBASIC20.09■□□□□ 0.81
ALDH1A1P00352 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.09■□□□□ 0.81
ALDH1A1P00352 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALDH1A1P00352 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms