Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.89□□□□□ -0.03
ABCA1O95477 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.89□□□□□ -0.03
ABCA1O95477 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 AL024508.2-201ENST00000607749 1894 ntBASIC14.88□□□□□ -0.03
ABCA1O95477 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ABCA1O95477 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.88□□□□□ -0.03
ABCA1O95477 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.88□□□□□ -0.03
ABCA1O95477 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.88□□□□□ -0.03
ABCA1O95477 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.88□□□□□ -0.03
ABCA1O95477 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ABCA1O95477 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ABCA1O95477 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.87□□□□□ -0.03
ABCA1O95477 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.87□□□□□ -0.03
ABCA1O95477 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.87□□□□□ -0.03
ABCA1O95477 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 AC007967.2-201ENST00000432613 625 ntBASIC14.87□□□□□ -0.03
ABCA1O95477 AC068472.1-201ENST00000474589 881 ntBASIC14.87□□□□□ -0.03
ABCA1O95477 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.87□□□□□ -0.03
ABCA1O95477 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.87□□□□□ -0.03
ABCA1O95477 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.87□□□□□ -0.03
ABCA1O95477 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ABCA1O95477 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
ABCA1O95477 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
ABCA1O95477 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ABCA1O95477 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ABCA1O95477 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
ABCA1O95477 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ABCA1O95477 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ABCA1O95477 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ABCA1O95477 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.86□□□□□ -0.03
ABCA1O95477 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.86□□□□□ -0.03
ABCA1O95477 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.86□□□□□ -0.03
ABCA1O95477 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.86□□□□□ -0.03
ABCA1O95477 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA1O95477 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms