Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SCAF4O95104 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 KSR1P1-201ENST00000446298 240 ntBASIC14.6□□□□□ -0.07
SCAF4O95104 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SCAF4O95104 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.6□□□□□ -0.07
SCAF4O95104 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.6□□□□□ -0.07
SCAF4O95104 AC009065.1-201ENST00000564055 1225 ntBASIC14.6□□□□□ -0.07
SCAF4O95104 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.6□□□□□ -0.07
SCAF4O95104 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.6□□□□□ -0.07
SCAF4O95104 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.6□□□□□ -0.07
SCAF4O95104 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
SCAF4O95104 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 PHGDH-209ENST00000641074 1780 ntBASIC14.6□□□□□ -0.07
SCAF4O95104 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 AL138688.1-201ENST00000624851 1594 ntBASIC14.6□□□□□ -0.07
SCAF4O95104 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.6□□□□□ -0.07
SCAF4O95104 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCAF4O95104 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.59□□□□□ -0.07
SCAF4O95104 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SCAF4O95104 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.59□□□□□ -0.07
SCAF4O95104 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SCAF4O95104 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SCAF4O95104 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SCAF4O95104 MIR564-202ENST00000385049 94 ntBASIC14.59□□□□□ -0.07
SCAF4O95104 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.59□□□□□ -0.07
SCAF4O95104 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.59□□□□□ -0.07
SCAF4O95104 AL596275.1-201ENST00000423464 877 ntBASIC14.59□□□□□ -0.07
SCAF4O95104 AC004980.1-204ENST00000429707 299 ntBASIC14.59□□□□□ -0.07
SCAF4O95104 AL355355.2-201ENST00000442321 338 ntBASIC14.59□□□□□ -0.07
SCAF4O95104 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.59□□□□□ -0.07
SCAF4O95104 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.59□□□□□ -0.07
SCAF4O95104 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.59□□□□□ -0.07
SCAF4O95104 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.59□□□□□ -0.07
SCAF4O95104 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.59□□□□□ -0.07
SCAF4O95104 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 AL596257.1-201ENST00000641463 2694 ntBASIC14.59□□□□□ -0.07
SCAF4O95104 AC007326.2-201ENST00000624224 7579 ntBASIC14.59□□□□□ -0.07
SCAF4O95104 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.59□□□□□ -0.07
SCAF4O95104 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.59□□□□□ -0.07
SCAF4O95104 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.59□□□□□ -0.07
SCAF4O95104 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SCAF4O95104 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.59□□□□□ -0.07
SCAF4O95104 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCAF4O95104 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.58□□□□□ -0.07
SCAF4O95104 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.58□□□□□ -0.07
SCAF4O95104 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
SCAF4O95104 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.58□□□□□ -0.07
SCAF4O95104 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.58□□□□□ -0.07
SCAF4O95104 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SCAF4O95104 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.58□□□□□ -0.08
SCAF4O95104 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SCAF4O95104 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SCAF4O95104 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SCAF4O95104 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SCAF4O95104 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms