Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.87■□□□□ 0.13
PFDN1O60925 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PFDN1O60925 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PFDN1O60925 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PFDN1O60925 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PFDN1O60925 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PFDN1O60925 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PFDN1O60925 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.87■□□□□ 0.13
PFDN1O60925 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PFDN1O60925 EEF1DP3-203ENST00000566025 782 ntBASIC15.87■□□□□ 0.13
PFDN1O60925 AC092171.4-201ENST00000609130 632 ntBASIC15.87■□□□□ 0.13
PFDN1O60925 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.87■□□□□ 0.13
PFDN1O60925 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PFDN1O60925 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.87■□□□□ 0.13
PFDN1O60925 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PFDN1O60925 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.86■□□□□ 0.13
PFDN1O60925 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
PFDN1O60925 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.86■□□□□ 0.13
PFDN1O60925 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PFDN1O60925 POU5F1P4-201ENST00000413175 1085 ntBASIC15.86■□□□□ 0.13
PFDN1O60925 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
PFDN1O60925 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.86■□□□□ 0.13
PFDN1O60925 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PFDN1O60925 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.86■□□□□ 0.13
PFDN1O60925 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 AC006058.4-201ENST00000624016 1670 ntBASIC15.86■□□□□ 0.13
PFDN1O60925 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.86■□□□□ 0.13
PFDN1O60925 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.86■□□□□ 0.13
PFDN1O60925 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PFDN1O60925 AC139749.1-202ENST00000617529 3139 ntBASIC15.85■□□□□ 0.13
PFDN1O60925 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PFDN1O60925 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
PFDN1O60925 AC060834.1-201ENST00000443027 2032 ntBASIC15.85■□□□□ 0.13
PFDN1O60925 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PFDN1O60925 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PFDN1O60925 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PFDN1O60925 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PFDN1O60925 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
PFDN1O60925 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PFDN1O60925 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PFDN1O60925 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PFDN1O60925 AC087386.2-201ENST00000623212 4637 ntBASIC15.85■□□□□ 0.13
PFDN1O60925 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PFDN1O60925 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.85■□□□□ 0.13
PFDN1O60925 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PFDN1O60925 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
PFDN1O60925 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms