Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFRA3O60609 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.11■□□□□ 0.33
GFRA3O60609 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GFRA3O60609 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.1■□□□□ 0.33
GFRA3O60609 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GFRA3O60609 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GFRA3O60609 FP475955.4-201ENST00000623131 1990 ntBASIC17.1■□□□□ 0.33
GFRA3O60609 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.1■□□□□ 0.33
GFRA3O60609 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 ELK2AP-201ENST00000392510 1007 ntBASIC17.1■□□□□ 0.33
GFRA3O60609 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.1■□□□□ 0.33
GFRA3O60609 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.1■□□□□ 0.33
GFRA3O60609 AC106886.1-201ENST00000568660 600 ntBASIC17.1■□□□□ 0.33
GFRA3O60609 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.1■□□□□ 0.33
GFRA3O60609 AC140912.1-201ENST00000577171 1054 ntBASIC17.1■□□□□ 0.33
GFRA3O60609 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.1■□□□□ 0.33
GFRA3O60609 AC084121.4-201ENST00000641598 221 ntBASIC17.1■□□□□ 0.33
GFRA3O60609 AF228730.8-201ENST00000642140 221 ntBASIC17.1■□□□□ 0.33
GFRA3O60609 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GFRA3O60609 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.1■□□□□ 0.33
GFRA3O60609 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GFRA3O60609 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
GFRA3O60609 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GFRA3O60609 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.09■□□□□ 0.33
GFRA3O60609 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
GFRA3O60609 SPCS2P4-201ENST00000436160 681 ntBASIC17.09■□□□□ 0.33
GFRA3O60609 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 RN7SL752P-201ENST00000463779 287 ntBASIC17.09■□□□□ 0.33
GFRA3O60609 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.09■□□□□ 0.33
GFRA3O60609 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GFRA3O60609 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.09■□□□□ 0.33
GFRA3O60609 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.09■□□□□ 0.33
GFRA3O60609 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 MIR6787-201ENST00000616675 61 ntBASIC17.09■□□□□ 0.33
GFRA3O60609 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 AC100757.3-201ENST00000622361 1406 ntBASIC17.09■□□□□ 0.33
GFRA3O60609 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 SIRPAP1-201ENST00000448467 1770 ntBASIC17.09■□□□□ 0.33
GFRA3O60609 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.09■□□□□ 0.33
GFRA3O60609 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GFRA3O60609 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GFRA3O60609 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GFRA3O60609 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GFRA3O60609 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.08■□□□□ 0.33
GFRA3O60609 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
GFRA3O60609 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GFRA3O60609 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.08■□□□□ 0.33
GFRA3O60609 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GFRA3O60609 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GFRA3O60609 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.08■□□□□ 0.32
GFRA3O60609 AKAP8P1-201ENST00000434743 1349 ntBASIC17.08■□□□□ 0.32
GFRA3O60609 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.08■□□□□ 0.32
GFRA3O60609 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.08■□□□□ 0.32
GFRA3O60609 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.08■□□□□ 0.32
GFRA3O60609 AC027369.6-201ENST00000525520 931 ntBASIC17.08■□□□□ 0.32
GFRA3O60609 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.08■□□□□ 0.32
GFRA3O60609 KRT8P23-201ENST00000560090 1207 ntBASIC17.08■□□□□ 0.32
GFRA3O60609 RARRES2P8-201ENST00000566335 367 ntBASIC17.08■□□□□ 0.32
GFRA3O60609 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.08■□□□□ 0.32
GFRA3O60609 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 SLC25A24-204ENST00000569674 2357 ntBASIC17.08■□□□□ 0.32
GFRA3O60609 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GFRA3O60609 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GFRA3O60609 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms