Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 AC022616.7-201ENST00000525383 220 ntBASIC16.99■□□□□ 0.31
PCDH7O60245 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH7O60245 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH7O60245 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCDH7O60245 AC139713.2-201ENST00000641328 2723 ntBASIC16.99■□□□□ 0.31
PCDH7O60245 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH7O60245 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH7O60245 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH7O60245 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
PCDH7O60245 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCDH7O60245 AL645608.8-201ENST00000606034 2086 ntBASIC16.98■□□□□ 0.31
PCDH7O60245 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH7O60245 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 RCN1P1-201ENST00000400413 996 ntBASIC16.98■□□□□ 0.31
PCDH7O60245 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH7O60245 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH7O60245 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH7O60245 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 AC005332.3-201ENST00000589904 676 ntBASIC16.98■□□□□ 0.31
PCDH7O60245 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.98■□□□□ 0.31
PCDH7O60245 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCDH7O60245 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH7O60245 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDH7O60245 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH7O60245 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH7O60245 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDH7O60245 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH7O60245 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDH7O60245 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDH7O60245 HLA-J-201ENST00000462773 1622 ntBASIC16.97■□□□□ 0.31
PCDH7O60245 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDH7O60245 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH7O60245 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH7O60245 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDH7O60245 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH7O60245 AL390719.2-201ENST00000606993 987 ntBASIC16.97■□□□□ 0.31
PCDH7O60245 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCDH7O60245 AC083849.1-201ENST00000615227 514 ntBASIC16.97■□□□□ 0.31
PCDH7O60245 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH7O60245 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH7O60245 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCDH7O60245 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH7O60245 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDH7O60245 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDH7O60245 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH7O60245 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH7O60245 AC141586.5-201ENST00000624546 2050 ntBASIC16.97■□□□□ 0.31
PCDH7O60245 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PCDH7O60245 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCDH7O60245 Z83836.1-201ENST00000624605 1642 ntBASIC16.96■□□□□ 0.31
PCDH7O60245 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 REXO1L11P-201ENST00000620964 1927 ntBASIC16.96■□□□□ 0.31
PCDH7O60245 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDH7O60245 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH7O60245 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH7O60245 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH7O60245 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms