Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.16■□□□□ 0.02
SSNA1O43805 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.16■□□□□ 0.02
SSNA1O43805 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SSNA1O43805 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 CYP2T1P-201ENST00000432607 1285 ntBASIC15.16■□□□□ 0.02
SSNA1O43805 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.16■□□□□ 0.02
SSNA1O43805 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.16■□□□□ 0.02
SSNA1O43805 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.16■□□□□ 0.02
SSNA1O43805 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.16■□□□□ 0.02
SSNA1O43805 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.16■□□□□ 0.02
SSNA1O43805 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.16■□□□□ 0.02
SSNA1O43805 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SSNA1O43805 RCC2P3-201ENST00000418112 1537 ntBASIC15.16■□□□□ 0.02
SSNA1O43805 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 AC092850.2-201ENST00000623821 2697 ntBASIC15.16■□□□□ 0.02
SSNA1O43805 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSNA1O43805 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.16■□□□□ 0.02
SSNA1O43805 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SSNA1O43805 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.15■□□□□ 0.02
SSNA1O43805 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.15■□□□□ 0.02
SSNA1O43805 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SSNA1O43805 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.15■□□□□ 0.02
SSNA1O43805 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.15■□□□□ 0.02
SSNA1O43805 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.15■□□□□ 0.02
SSNA1O43805 AC006557.6-201ENST00000623071 864 ntBASIC15.15■□□□□ 0.02
SSNA1O43805 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.15■□□□□ 0.02
SSNA1O43805 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.15■□□□□ 0.02
SSNA1O43805 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SSNA1O43805 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SSNA1O43805 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SSNA1O43805 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.14■□□□□ 0.01
SSNA1O43805 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.14■□□□□ 0.01
SSNA1O43805 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 AC060834.1-201ENST00000443027 2032 ntBASIC15.14■□□□□ 0.01
SSNA1O43805 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.14■□□□□ 0.01
SSNA1O43805 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SSNA1O43805 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 AP000593.1-201ENST00000393668 712 ntBASIC15.14■□□□□ 0.01
SSNA1O43805 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.14■□□□□ 0.01
SSNA1O43805 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.14■□□□□ 0.01
SSNA1O43805 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.14■□□□□ 0.01
SSNA1O43805 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.14■□□□□ 0.01
SSNA1O43805 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SSNA1O43805 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.14■□□□□ 0.01
SSNA1O43805 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSNA1O43805 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms