Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.93■□□□□ 0.78
ACTN4O43707 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.93■□□□□ 0.78
ACTN4O43707 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.93■□□□□ 0.78
ACTN4O43707 LINC01023-201ENST00000606054 436 ntBASIC19.93■□□□□ 0.78
ACTN4O43707 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ACTN4O43707 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.93■□□□□ 0.78
ACTN4O43707 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.93■□□□□ 0.78
ACTN4O43707 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 LINC01311-201ENST00000565162 1445 ntBASIC19.93■□□□□ 0.78
ACTN4O43707 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
ACTN4O43707 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.92■□□□□ 0.78
ACTN4O43707 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
ACTN4O43707 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
ACTN4O43707 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
ACTN4O43707 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.92■□□□□ 0.78
ACTN4O43707 AC005104.2-201ENST00000427818 678 ntBASIC19.92■□□□□ 0.78
ACTN4O43707 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ACTN4O43707 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.92■□□□□ 0.78
ACTN4O43707 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.92■□□□□ 0.78
ACTN4O43707 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.92■□□□□ 0.78
ACTN4O43707 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ACTN4O43707 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.92■□□□□ 0.78
ACTN4O43707 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ACTN4O43707 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACTN4O43707 PCDHA12-202ENST00000613593 2588 ntBASIC19.91■□□□□ 0.78
ACTN4O43707 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 PRORSD1P-202ENST00000563365 2154 ntBASIC19.91■□□□□ 0.78
ACTN4O43707 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ACTN4O43707 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.91■□□□□ 0.78
ACTN4O43707 AC063952.2-201ENST00000498792 1227 ntBASIC19.91■□□□□ 0.78
ACTN4O43707 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.91■□□□□ 0.78
ACTN4O43707 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.91■□□□□ 0.78
ACTN4O43707 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ACTN4O43707 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.91■□□□□ 0.78
ACTN4O43707 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ACTN4O43707 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 AC106820.2-201ENST00000563775 3264 ntBASIC19.9■□□□□ 0.78
ACTN4O43707 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.9■□□□□ 0.78
ACTN4O43707 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.9■□□□□ 0.78
ACTN4O43707 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.9■□□□□ 0.78
ACTN4O43707 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.9■□□□□ 0.78
ACTN4O43707 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 BX276092.7-203ENST00000637198 1536 ntBASIC19.9■□□□□ 0.78
ACTN4O43707 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.9■□□□□ 0.78
ACTN4O43707 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 Z83836.1-201ENST00000624605 1642 ntBASIC19.9■□□□□ 0.78
ACTN4O43707 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ACTN4O43707 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
ACTN4O43707 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.9■□□□□ 0.78
ACTN4O43707 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 AC009053.2-201ENST00000563701 2365 ntBASIC19.9■□□□□ 0.78
ACTN4O43707 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ACTN4O43707 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ACTN4O43707 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ACTN4O43707 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ACTN4O43707 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms